SE15:/DS1

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Sample Set Information

ID SE15
Title Comparison of fruit metabolites among developmental stages of Jatropha curcas
Description Investigation of Jatropha curcas fruit metabolites. 4 developmental stages and 3 replicates data are examined.
Authors Ryosuke Sano 1, Takeshi Ara 1, Nayumi Akimoto 1, Yoshihiko Morishita 1, Mitsuo Enomoto 1, Nozomu Sakurai 1, Hideyuki Suzuki 1, Yasunori Fukuzawa 2, Yoshinobu Kawamitsu 2, Masami Ueno 2, Daisuke Shibata 1, 1: Kazusa DNA Research Institute, 2: Faculty of Agriculture, University of the Ryukyus
Reference Sano R. et al. (2012) Plant Biotechnology 29: 175-178
Comment version 4


Link icon database.png Link icon pgdbj.png

The web resources and information related to the species used in this study are available at Plant Genome Database Japan (PGDBj).

Data Analysis Details Information

ID DS1
Title PowerGet analysis for annotation of peaks with MS/MS (A5)
Description Raw data files are converted to text file by MSGet software without cut off value and peaks are extracted from the text files by PowerFT with parameters (intensity cut off in peak detection=30000, margin of ion grouping in peak detection=5, peak selection filter is default). The replicates data are aligned by PowerMatch with blank data. The alignment is manually edited. Assigned peaks observed in multiple replicate samples are selected for annotation process. Assigned peaks with clear MS2 data are selected for the registration of Bio-MassBank.
Comment_of_details


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