SE68:/S088/M1/D1

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Sample Set Information

ID SE68
Title Analysis of Ophiorrhiza pumila
Description WT and transgenic lines of Ophiorrhiza pumila were analyzed by LC-FT-ICR-MS.
Authors Takeshi Ara, Daisuke Shibata, Koh Aoki, Nozomu Sakurai, Ryosuke Sasaki, Takashi Asano, Mami Yamazaki, Lab. Genome Biotech, Kazusa DNA Research Institute, Japan; Graduate School of Pharmaceutical Sciences, Chiba University, Japan
Reference Direct submission;

Yamazaki M, Mochida K, Asano T, Nakabayashi R, Chiba M, Udomson N, Yamazaki Y, Goodenowe DB, Sankawa U, Yoshida T, Toyoda A, Totoki Y, Sakaki Y, Góngora-Castillo E, Buell CR, Sakurai T, Saito K. Coupling deep transcriptome analysis with untargeted metabolic profiling in Ophiorrhiza pumila to further the understanding of the biosynthesis of the anti-cancer alkaloid camptothecin and anthraquinones. Plant Cell Physiol 2013 54: 686-96

Comment NS deposited the metadata, most of which were retrieved from MassBase. For more detailed information, please contact the authors directly or via NS (email: metabolonote [at] kazusa.or.jp).;PMID:23503598


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Sample Information

ID S088
Title Ophiorrhiza pumila
Organism - Scientific Name Ophiorrhiza pumila
Organism - ID NCBI Taxonomy:157934
Compound - ID
Compound - Source
Preparation
Sample Preparation Details ID
Comment

Analytical Method Information

ID M1
Title LC-FTICR-MS, ESI Positive analysis
Method Details ID MS1
Sample Amount
Comment MassBase ID:MDLC1_10622, Method ID:MTLC0618


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The raw (binary) and near-raw (text) files of this analysis are available at MassBase.

Analytical Method Details Information

ID MS1
Title LC-FTICR-MS, ESI Positive analysis
Instrument LC-FT-ICR-MS; [Agilent 1100 LC (Agilent Technologies); Finnigan LTQ-FT (Thermo Fisher Scientific K.K.)]
Instrument Type LC-FTICR-MS
Ionization ESI
Ion Mode Positive
Description
Comment_of_details

Data Analysis Information

ID D1
Title Auto peak detection by PowerGetBatch
Data Analysis Details ID DS1
Recommended decimal places of m/z
Comment


Data Analysis Details Information

ID DS1
Title Auto peak detection by PowerGetBatch
Description
Comment_of_details
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