SE98:/S1/M2/D1

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Sample Set Information

ID SE98
Title Analysis of Lotus japonicus leaves and stems
Description Metabolites in leaves and stems of Lotus japonicus were analyzed by LC-FT-ICR-MS.
Authors Takeshi Ara, Hideyuki Suzuki, Daisuke Shibata, Nozomu Sakurai, Ryosuke Sasaki, Makoto Hirosawa, Lab. Genome Biotech, Kazusa DNA Research Institute, Japan; Center for Development of Biotech Industries, Kazusa DNA Research Institute, Japan
Reference Direct submission
Comment NS deposited the metadata, most of which were retrieved from MassBase. For more detailed information, please contact the authors directly or via NS (email: metabolonote [at] kazusa.or.jp).

Sample Information

ID S1
Title Lotus japonicus MG-20 Leaf
Organism - Scientific Name Lotus japonicus
Organism - ID NCBI Taxonomy:34305
Compound - ID
Compound - Source
Preparation
Sample Preparation Details ID
Comment

Analytical Method Information

ID M2
Title LC-FTICR-MS, ESI Positive analysis
Method Details ID MS3
Sample Amount
Comment [MassBase ID] MDLC1_05228


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The raw (binary) and near-raw (text) files of this analysis are available at MassBase.

Analytical Method Details Information

ID MS3
Title LC-FT-ICR-MS ESI positive method 3
Instrument Agilent1100 HPLC (Agilent), LTQ-FT (Thermo Fisher Scientific)
Instrument Type LC-FTICR-MS
Ionization ESI
Ion Mode Positive
Description Harvested sample is frozen by liquid N2 and resulting powder (100mg) are solved in 300uL 80% methanol solution. 20uL sample is injected into HPLC after 0.2um membrane filter treatment. HPLC conditions: Agilent 1100 series (Agilent), Column: TSKgel-100V (4.6 x 250 mm, 5 micrometer; TOSOH), Solvent: A; 0.1% formic acid aq. B; ACN (addition 0.1% formic acid fc.), Gradient: (B);3 to 30% (0.0 to 25.0 min), 30 to 90% (25.0 to 40.0 min), 90% (40.0 to 45.0 min), 95% (45.1 to 50.0 min), 3% (50.1 to 57.0 min), Column temp.: 30 degree C, Flow rate=0.5mL/min, PDA: 200-650 nm (2 nm step). FT-ICR-MS conditions: Filter 1: FTMS + c norm !corona !pi res=100000 o(200.0-1500.0); 2: ITMS + c norm !corona !pi Dep MS/MS Most intense ion from (1)., Rejected mass=284.2000;300.2000;328.2000;344.2000;372.2000;388.2000;416.3000;432.3000;460.0000.
Comment_of_details [MassBase Method ID] MTLC0318

Data Analysis Information

ID D1
Title Auto peak detection by PowerGetBatch
Data Analysis Details ID DS1
Recommended decimal places of m/z
Comment


Data Analysis Details Information

ID DS1
Title Auto peak detection by PowerGetBatch
Description
Comment_of_details
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